aipoch-ai

A skill for performing sequence alignment using NCBI BLAST API. Supports nucleotide and protein sequence comparison against major biological databases.

Query and annotate gene variants from ClinVar and dbSNP databases. Trigger when: - User provides a variant identifier (rsID, HGVS notation, genomic coordinat...

Filter compound libraries based on Lipinski's Rule of Five for drug-likeness.

Use medical translation for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Generate journal club slides with background, critique, and discussion.

Generate structured shift handover summaries from EHR records, highlighting critical events, vital sign changes, and pending tasks for incoming clinical staff.

Use semantic consistency auditor for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Use sanger chromatogram qa for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.

Basic sample size calculator for clinical research planning with common statistical scenarios

Advanced sample size and power calculations for complex study designs including survival analysis, clustered designs, and multiple comparisons.

Write GCP-compliant Standard Operating Procedures for labs and clinical sites

Analyze data with `smiles-de-salter` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Extract hazard codes and safety info from chemical safety datasheets.

Design multi-omics integration strategies for transcriptomics, proteomics, and metabolomics data analysis

Transform lengthy academic papers into concise, structured 250-word abstracts capturing background, methods, results, and conclusions. Optimized for research...

Structures and writes discussion sections for academic papers and research reports. Use when writing a discussion section, interpreting research results, con...

Track manuscript resubmission deadlines and automatically generate phase-appropriate task breakdowns for academic researchers based on remaining time.

Generate medical referral letters with patient summary, reason for referral.

One-click synchronization and standardization of reference formats in literature management tools, intelligently fixing metadata errors.

Helps faculty and mentors draft standardized recommendation letters for.

Use rebuttal letter strategist for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Find validated alternative reagents based on literature citation data.

Map patient symptoms to Human Phenotype Ontology terms for gene diagnosis.

Generate block randomization lists for RCTs

A medical assistant tool that transforms complex biochemical laboratory test results into clear, patient-friendly explanations with safety disclaimers and se...

Train high-performance medical LLMs on consumer GPUs using parameter-efficient fine-tuning

Automatically summarize scientific podcasts like Huberman Lab and Nature.

AI-powered EHR summarization using Transformer architecture to extract key clinical information from lengthy medical records

Build complex Boolean query strings for precise PubMed/MEDLINE literature retrieval. Trigger when user needs MeSH term mapping, Boolean query construction, a...

Use when drafting patient discharge summaries, creating personalized discharge instructions, simulating post-discharge outcomes, reducing hospital readmissio...

Analyze data with `pseudotime-trajectory-viz` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Generate PyMOL scripts to highlight specific protein residues in PDB structures. Use this skill when the user needs to visualize specific amino acid residues...

Prepare input files for molecular docking software, automatically determine Grid Box center and size. Supports AutoDock Vina, AutoDock4, and other mainstream...

Analyze laboratory alumni career trajectories and outcomes to provide data-driven career guidance for current students and postdocs. Tracks industry vs acade...

Design CRISPR gRNA sequences for specific gene exons with off-target prediction and efficiency scoring. Trigger when user needs gRNA design, CRISPR guide RNA...

Generate professional prior authorization request letters for insurance companies with proper clinical justification and formatting.

Track lab equipment calibration dates and send maintenance reminders for pipettes, balances, centrifuges, and other instruments. Validates date formats and s...

Use when formatting references for journal submission, converting between citation styles (APA, MLA, Vancouver, Chicago), generating bibliographies for manus...

Predict challenging questions for presentations and prepare responses

Build digital twin patient models to test drug efficacy and toxicity in virtual environments

Calculate Body Mass Index (BMI) and Body Surface Area (BSA) for clinical assessment and drug dosing. Supports multiple BSA formulas (DuBois, Mosteller, Hayco...

Transform unstructured clinical input (dictation, transcripts, or rough notes) into standardized SOAP (Subjective, Objective, Assessment, Plan) medical docum...

Generate narrative budget justifications for NIH/NSF applications

Extracts and summarizes key takeaways from documents, meeting notes, articles, and other text content. Use when the user asks for summaries, bullet points, m...

Use when creating journal cover images, generating scientific artwork prompts, or designing graphical abstracts. Creates detailed prompts for AI image genera...

Design clinical trial CRFs with proper validation rules

Generates detailed text descriptions of medical images and charts for.

Generate USMLE Step 1/2 style clinical cases with patient history, physical.

Automated abstract screening tool for systematic literature reviews with PRISMA workflow support.

Recommends appropriate statistical methods (T-test vs ANOVA, etc.) based.

Creates engaging opening statements and powerful closings for medical.

Use poster layout planner for other workflows that need structured execution, explicit assumptions, and clear output boundaries.

Filter and match postdoctoral fellowship opportunities based on applicant nationality, years since PhD, and research field from a curated database.

Analyze data with `phylogenetic-tree-styler` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Use when writing medical school personal statements, residency application essays, fellowship statements, or graduate school admissions essays. Crafts compel...

Generate ethical, compliant, and patient-friendly recruitment advertisements for clinical trials.

Use pathology roi selector for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.

Use when analyzing biotech patent landscapes, identifying white spaces in pharmaceutical IP, tracking competitor patents, or assessing freedom to operate for...

Use when mapping patent claims to products, analyzing patent infringement, or preparing freedom-to-operate analyses. Compares patent claims against product f...

Use when finding open access journals, checking journal policies, or identifying predatory publishers. Helps researchers locate legitimate open access venues...

Draft professional follow-up emails to contacts made at conferences - not too pushy, but memorable.

Generate NIH Biosketch documents compliant with the 2022 OMB-approved.

Generate NIH Biosketch documents compliant with the 2022 OMB-approved.

Assemble 6 sub-figures (A–F) into a high-resolution composite figure with consistent labels, padding, and publication-ready DPI.

Recommend optimal flow cytometry gating strategies for specific cell types and fluorophores

Analyze data with `survival-curve-risk-table` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Generates Kaplan-Meier survival curves, calculates survival statistics (log-rank test, median survival time), and estimates hazard ratios for clinical and bi...

Beautify FACS gating plots for publication

Track lab equipment calibration dates and send maintenance reminders

Search FDA industry guidelines by therapeutic area or topic. Trigger when user requests FDA guidance documents, regulatory guidelines, or asks about FDA requ...

Provides correct pronunciation guides for complex drug generic names. Generates phonetic transcriptions using IPA and audio generation markers for medical te...

Evidence-Based Medicine calculator for sensitivity, specificity, PPV, NPV, NNT, and likelihood ratios. Essential for clinical decision making and biostatisti...

Design dashboard layout sketches for clinical trials showing enrollment progress and adverse event rates

Generate hospital discharge summaries from admission data, hospital course, medications, and follow-up plans. Trigger when user needs to create a discharge s...

Calculates gestational age and follow-up date windows.

Generates Mermaid flowchart code and visual diagrams for pathophysiological.

Automatically recommend ICD-10 diagnosis codes and CPT procedure codes from clinical notes. Trigger when: user provides clinical notes, patient encounter sum...

Summarize core safety information from Investigator's Brochures for clinical researchers

Draft IACUC protocol applications with focus on the 3Rs principles justification

Professional beautification tool for gene expression heatmaps, automatically adds clustering trees, color annotation tracks, and intelligently optimizes labe...

Automatically detect and de-identify PII (Personal Identifiable Information) and PHI (Protected Health Information) from clinical/medical text to ensure HIPA...

Monitor bioRxiv/medRxiv preprints and academic discussions to identify emerging research hotspots before they appear in mainstream journals

Beautify meta-analysis forest plots with customizable odds ratio points and confidence intervals

Generate graphical abstract layout recommendations based on paper abstracts

Use when interpreting scientific graphs and charts, explaining data visualizations for research presentations, writing figure captions for publications, or a...

Grant proposal writing assistant for NIH (R01/R21), NSF and other mainstream funding applications. Triggers when user needs help writing specific aims, resea...

Simulates behavioral interview questions for medical professionals.

Generate and optimize clinical trial subject inclusion/exclusion criteria to balance scientific rigor with recruitment feasibility. Trigger when users need t...

Detect image duplication and tampering in manuscript figures using computer vision algorithms

Create project timeline visualizations for grant proposals

Assists researchers with Institutional Review Board (IRB) application tasks, including drafting informed consent documents, reviewing research protocols for...

NIH funding trend analysis to identify high-priority research areas

Optimize IHC/IF protocols for specific tissues and antigens

Automatically scan document reference lists and check against Retraction.

Mock interview preparation tool for residency Match interviews. Generates.

Scan reagent barcodes or IDs, log expiration dates, and generate multi-level alerts before reagent expiry to support laboratory inventory management.

Use market access value for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Performs GO (Gene Ontology) and KEGG pathway enrichment analysis on gene lists. Trigger when: - User provides a list of genes (symbols or IDs) and asks for e...

Use when creating radiology educational quizzes, preparing board exam questions, or studying medical imaging cases. Generates interactive quizzes with X-ray,...

Check primers for dimers, hairpins, and off-target amplification

Analyze physician academic influence and collaboration networks

Show journal impact factor and quartile trends over 5 years.

Draft Diversity, Equity, and Inclusion statements for academic applications

Detect copy number variations from whole genome sequencing data and generate publication-quality genome-wide CNV plots. Supports CNV calling, segmentation, a...

Grammar checking tool for AMA style medical writing

Visualize gene structure with exon-intron diagrams, domain annotations, and mutation position markers. Produces SVG, PNG, or PDF figures suitable for publica...

Predict funding trend shifts using NLP analysis of grant abstracts from NIH, NSF, and Horizon Europe

Track and retrieve sample locations in -80°C freezers with hierarchical storage organization. Trigger conditions: - User needs to record sample storage posit...

Simulates NIH study section peer review for grant proposals. Triggers when user wants mock review, critique, or evaluation of a grant proposal before submiss...

Use when identifying collaboration opportunities across fields, finding experts in complementary disciplines, translating methodologies between scientific do...

Adapt abstracts to meet specific conference word limits and formats

Calculate complex buffer recipes with precise measurements for molecular biology and biochemistry applications. Provides accurate mass/volume calculations, p...

Uses analogies to explain complex medical concepts in accessible terms.

Auto-generates comparison tables for concepts, drugs, or study results in Markdown format.

Predict which early-stage biotechnology platforms (PROTAC, mRNA, gene editing, etc.) have the highest potential to become blockbuster therapies. Analyzes cli...

Automatically generate NIH 2023-compliant Data Management and Sharing Plan (DMSP) drafts following FAIR principles

Generates professional cover letters for journal submissions and job applications in medical and academic contexts.

Check for co-authorship conflicts between authors and suggested reviewers

Fix garbled text in PDF/SVG vector graphics caused by font encoding issues, making files editable in AI tools. Supports batch processing and JSON export for...

Virtual gene knockout simulation using foundation models to predict transcriptional changes

Mine unstructured clinical text from MIMIC-IV to extract diagnostic logic.

Use blind-review-sanitizer for academic writing workflows that need structured anonymization, explicit assumptions, and clear output boundaries for double-bl...

Use preclinical pkpd analyst for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.

Monitor and summarize competitor clinical trial status changes from ClinicalTrials.gov. Trigger: When user asks to track clinical trials, monitor trial statu...

Simplify informed consent documents into patient-friendly language while maintaining regulatory compliance (FDA 21CFR50, ICH-GCP, HIPAA) and required legal e...

Use outlier detection handler for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.

Check if referenced bioinformatics software/code licenses allow commercial use (GPL vs MIT, etc.).

Monitor competitor clinical trial progress and alert on market risks

Use when identifying seminal papers in a research field, mapping research lineage and intellectual heritage, discovering related work through reference track...

Calculate cold chain transport risks

Convert medical textbook content, lecture notes, and study materials into Anki flashcards using spaced repetition optimization. Supports multiple card types...

Use when creating biotech pitch decks, translating scientific data for investors, preparing fundraising presentations, or developing investor Q&A. Transforms...

Convert written medical content into podcast or video scripts optimized for audio delivery. Transforms academic papers, reports, and educational materials in...

Generate CIOMS-compliant adverse event narratives for Individual Case Safety Reports (ICSR). Creates structured pharmacovigilance documents following CIOMS I...

Generates comprehensive two-sample Mendelian randomization study designs with four workload options from user-specified exposures and outcomes for causal inf...

Process CRISPR screening data to identify essential genes and hit candidates. Performs quality control, statistical analysis (RRA), and hit calling for poole...

Humanize murine antibody sequences using CDR grafting and framework optimization to reduce immunogenicity while preserving antigen binding. Predicts optimal...

Disambiguate medical acronyms and abbreviations with context-aware full form lookup. Resolves ambiguous abbreviations (e.g., 'PID' = Pelvic Inflammatory Dise...

Generate single-cell RNA-seq analysis code templates for Seurat and Scanpy, supporting QC, clustering, visualization, and downstream analysis. Trigger when u...

Calculate breeding timelines and cage requirements for transgenic mouse colonies

Generate publication-quality sequence logos for DNA or protein motifs.

Batch anonymize DICOM medical images by removing patient sensitive information (name, ID, birth date) while preserving image data for research use. Trigger w...

Use when optimizing LinkedIn profiles for doctors, physicians, nurses, healthcare professionals, or medical researchers. Crafts compelling headlines, writes...

Generate 3D animation scripts and lay explanations for drug mechanisms.

Create memory aids for anatomy and pharmacology

Analyze data with `metagenomic-krona-chart` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Add accurate, publication-ready scale bars to microscopy images given pixel-to-unit calibration data.

Interpret Alpha and Beta diversity metrics from 16S rRNA sequencing results.

Batch extraction of experimental methods from multiple papers for protocol.

Use when creating forest plots for meta-analyses, visualizing effect sizes across studies, or generating publication-ready meta-analysis figures. Produces hi...

Convert between IUPAC names, SMILES strings, and molecular formulas for chemical compounds. Supports structure validation, identifier interconversion, and ch...

Generate structured agendas for mentor-student one-on-one meetings

Use meeting minutes for other workflows that need structured execution, explicit assumptions, and clear output boundaries.

Compare patient pre-admission medication lists with inpatient orders to automatically identify omitted or duplicated medications and improve medication safety.

Use medication adherence message gen for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Convert medical laboratory values between units (mg/dL to mmol/L, etc.) with formula transparency and clinical reference ranges. Supports glucose, cholestero...

Generate interactive anatomy quizzes for medical education with multiple question types, difficulty levels, and anatomical regions. Supports gross anatomy, n...

Automatically convert uploaded drug application documents (Word/PDF) into XML skeleton structure compliant with eCTD 4.0/3.2.2 specifications.

Simulate standardized patient encounters for medical training, supporting OSCE-style history-taking practice, communication skills rehearsal, and educational...

Check for drug-drug interactions between multiple medications. Trigger when user asks about medication compatibility, "can I take X with Y", drug interaction...

Convert complex Venn diagrams with more than 4 sets to clearer Upset.

Generate standardized experiment templates for Electronic Laboratory Notebooks

Generate standardized figure legends for scientific charts and graphs. Trigger when user uploads/requesting legend for research figures, academic papers, or...

Auto-annotate cell clusters from single-cell RNA data using marker genes.

Assess translational gaps between preclinical models and human diseases.

Use when planning conference schedules, optimizing session selection at scientific meetings, managing time between presentations, or maximizing networking at...

Analyze data with `toxicity-structure-alert` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Use when converting medical text between academic and patient-friendly tones, translating medical jargon for patients, adapting research papers for public au...

Plan cross-time-zone meeting windows for distributed teams, providing region-by-region local time mappings and tradeoff analysis for scheduling decisions.

Automated generation of baseline characteristics tables (Table 1) for clinical research papers.

Design gene circuits for synthetic biology applications

Use when cleaning clinical trial data, preparing data for FDA/EMA submission, standardizing SDTM datasets, handling missing values in clinical studies, detec...

Design and simulate adaptive clinical trials with interim analyses, sample size re-estimation, and early stopping rules. Evaluate Type I error control, power...

Generate photorealistic rendering scripts for PyMOL and UCSF ChimeraX.

Calculate temperature excursion risks for cold chain transport. Assesses route risk, packaging suitability, and monitoring requirements for biological sample...

Converts complex medical abstracts into plain language summaries for.

Use conference poster pitch for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Use when refactoring research code for publication, adding documentation to existing analysis scripts, creating reproducible computational workflows, or prep...

Convert physician verbal dictation into structured SOAP notes. Trigger.

Transforms rough email drafts into polished, professional medical correspondence.

Audit medical device technical files against EU MDR 2017/745 regulations.

Use medical cv resume builder for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Use blind-review-sanitizer for academic writing workflows that need structured anonymization, explicit assumptions, and clear output boundaries for double-bl...

Map unstructured biomedical text to standardized ontologies (SNOMED CT.

Use when determining author order on research manuscripts, assigning CRediT contributor roles for transparency, documenting individual contributions to colla...

Analyze data with `adme-property-predictor` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Generates four-tier FAERS study designs comparing user-specified drugs within one SOC for multi-drug safety signal analysis, including workflows and publicat...

Generates four-tiered network toxicology and molecular docking research designs for a toxicant-disease pair, including workflows, validations, and publicatio...

Automatically identify Western Blot gel bands, perform densitometric analysis, and calculate normalized values relative to loading controls.

Guide for disposing specific chemical wastes into the correct colored waste containers, with safety precautions and regulatory compliance notes.

Western Blot troubleshooting guide with step-by-step solutions

Generates FAQ lists from complex medical policies or protocols. Trigger when user provides medical documents, policies, or protocols and requests FAQ generat...

Check image DPI and intelligently upscale low-resolution images using super-resolution

Generate R/Python code for volcano plots from DEG (Differentially Expressed Genes) analysis results. Triggered when user needs visualization of gene expressi...

Analyze data with `volcano-plot-labeler` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Record experimental procedures and observations via voice commands during lab work. Real-time transcription for structured experiment documentation.

Integrate REVEL, CADD, PolyPhen scores to predict variant pathogenicity.

Score the novelty of biological targets through literature mining and.

Polishes response letters by transforming defensive or harsh language.

Determine whether an incident in a clinical trial is a "major deviation.

Suggest triage levels (Emergency, Urgent, Outpatient) based on red flag symptoms using a rule-based engine. For AI-assisted decision support only — not a sub...

Use study limitations drafter for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Map spatial transcriptomics data from 10x Genomics Visium/Xenium onto.

Use smart journal monitor for evidence insight workflows that need structured execution, explicit assumptions, and clear output boundaries.

Generate PowerPoint presentations and academic posters from paper abstracts or full paper content, with automatic layout optimization and citation formatting.

Recommend suitable high-impact factor or domain-specific journals for manuscript submission based on abstract content. Trigger when user provides paper abstr...

Design multicolor flow cytometry panels minimizing spectral overlap

Use when analyzing FASTQC quality reports from sequencing data, identifying quality issues in NGS datasets, or troubleshooting sequencing problems. Interpret...