Analyze biological data using Lobster AI — single-cell RNA-seq, bulk RNA-seq,
literature mining, dataset discovery, quality control, and visualization.
USE THIS SKILL WHEN:
- Analyzing single-cell or bulk RNA-seq data
- Searching PubMed/GEO for papers or datasets
- Running quality control on biological data
- Clustering cells, finding markers, differential expression
- Creating publication-quality visualizations
- Working with H5AD, CSV, 10X, GEO/SRA accessions
TRIGGER PHRASES: "analyze cells", "search PubMed", "download GEO", "run QC",
"cluster", "find markers", "differential expression", "UMAP", "volcano plot",
"single-cell", "RNA-seq", "bioinformatics"
ASSUMES: Lobster is installed and configured. For setup issues, tell user to
run `lobster config-test` and fix any errors before proceeding.
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